Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC174Coiled-coil domain containing 174. (440 aa)    
Predicted Functional Partners:
EIF4A3
Eukaryotic translation initiation factor 4A3.
    
 
 0.962
NRDE2
NRDE-2, necessary for RNA interference, domain containing.
    
 
 0.918
UEVLD
UEV and lactate/malate dehyrogenase domains.
     
  0.882
ZNF706
Zinc finger protein 706.
      
 0.879
ALPK3
Alpha kinase 3.
      
 0.861
GPATCH1
G-patch domain containing 1.
    
 
 0.806
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
   0.736
ENSCAPP00000006864
annotation not available
   
  
 0.691
HSPA5
Heat shock protein family A (Hsp70) member 5.
   
    0.686
ENSCAPP00000006264
annotation not available
   
    0.667
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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