STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001291annotation not available (186 aa)    
Predicted Functional Partners:
DKC1
Dyskerin pseudouridine synthase 1.
   
 0.999
MPHOSPH10
M-phase phosphoprotein 10.
   
 0.999
WDR36
WD repeat domain 36.
   
 0.999
NOP14
NOP14 nucleolar protein.
   
 0.999
BMS1
BMS1 ribosome biogenesis factor.
   
 0.999
NOL10
Nucleolar protein 10.
   
 0.999
HEATR1
HEAT repeat containing 1.
   
 0.999
NOL6
Nucleolar protein 6.
   
 0.999
NOC4L
Nucleolar complex associated 4 homolog.
   
 0.999
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
 0.999
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.