STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001307annotation not available (879 aa)    
Predicted Functional Partners:
LRP8
LDL receptor related protein 8.
    
 0.987
VLDLR
Very low density lipoprotein receptor.
    
 0.981
ITGA3
Integrin subunit alpha 3.
    
 0.930
ITGB1
Integrin subunit beta 1.
    
 0.926
LDLR
Low density lipoprotein receptor.
    
 0.899
DAB1
DAB adaptor protein 1.
    
 0.851
ITGB8
Integrin subunit beta 8.
    
 0.829
ITGA6
Integrin subunit alpha 6.
    
 0.827
ITGA7
Integrin subunit alpha 7.
    
 0.827
ITGA10
Integrin subunit alpha 10.
    
 0.827
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.