MTCL1 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

MTCL1

Microtubule crosslinking factor 1. (1583 aa)

Predicted Functional Partners:

MARK4

0.845

MARK3

0.845

ENSCAPP00000008582

0.845

PPP2R2B

0.802

PPP2R2C

0.781

ENSCAPP00000012442

0.751

MARK1

0.727

ENSCAPP00000010697

0.689

LHFPL2

0.685

ENSCAPP00000003357

0.661

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000003357	MTCL1	ENSCAPP00000003357	ENSCAPP00000001318	annotation not available	Microtubule crosslinking factor 1.	0.661
ENSCAPP00000003357	PPP2R2B	ENSCAPP00000003357	ENSCAPP00000015761	annotation not available	Protein phosphatase 2 regulatory subunit Bbeta.	0.879
ENSCAPP00000003357	PPP2R2C	ENSCAPP00000003357	ENSCAPP00000013796	annotation not available	Protein phosphatase 2 regulatory subunit Bgamma.	0.958
ENSCAPP00000008582	MARK1	ENSCAPP00000008582	ENSCAPP00000007205	annotation not available	Microtubule affinity regulating kinase 1.	0.684
ENSCAPP00000008582	MTCL1	ENSCAPP00000008582	ENSCAPP00000001318	annotation not available	Microtubule crosslinking factor 1.	0.845
ENSCAPP00000008582	PPP2R2C	ENSCAPP00000008582	ENSCAPP00000013796	annotation not available	Protein phosphatase 2 regulatory subunit Bgamma.	0.414
ENSCAPP00000010697	ENSCAPP00000012442	ENSCAPP00000010697	ENSCAPP00000012442	annotation not available	annotation not available	0.786
ENSCAPP00000010697	LHFPL2	ENSCAPP00000010697	ENSCAPP00000016750	annotation not available	LHFPL tetraspan subfamily member 2.	0.570
ENSCAPP00000010697	MTCL1	ENSCAPP00000010697	ENSCAPP00000001318	annotation not available	Microtubule crosslinking factor 1.	0.689
ENSCAPP00000010697	PPP2R2B	ENSCAPP00000010697	ENSCAPP00000015761	annotation not available	Protein phosphatase 2 regulatory subunit Bbeta.	0.772
ENSCAPP00000012442	ENSCAPP00000010697	ENSCAPP00000012442	ENSCAPP00000010697	annotation not available	annotation not available	0.786
ENSCAPP00000012442	LHFPL2	ENSCAPP00000012442	ENSCAPP00000016750	annotation not available	LHFPL tetraspan subfamily member 2.	0.734
ENSCAPP00000012442	MTCL1	ENSCAPP00000012442	ENSCAPP00000001318	annotation not available	Microtubule crosslinking factor 1.	0.751
LHFPL2	ENSCAPP00000010697	ENSCAPP00000016750	ENSCAPP00000010697	LHFPL tetraspan subfamily member 2.	annotation not available	0.570
LHFPL2	ENSCAPP00000012442	ENSCAPP00000016750	ENSCAPP00000012442	LHFPL tetraspan subfamily member 2.	annotation not available	0.734
LHFPL2	MTCL1	ENSCAPP00000016750	ENSCAPP00000001318	LHFPL tetraspan subfamily member 2.	Microtubule crosslinking factor 1.	0.685
MARK1	ENSCAPP00000008582	ENSCAPP00000007205	ENSCAPP00000008582	Microtubule affinity regulating kinase 1.	annotation not available	0.684
MARK1	MARK3	ENSCAPP00000007205	ENSCAPP00000007156	Microtubule affinity regulating kinase 1.	Microtubule affinity regulating kinase 3.	0.684
MARK1	MARK4	ENSCAPP00000007205	ENSCAPP00000004912	Microtubule affinity regulating kinase 1.	Microtubule affinity regulating kinase 4.	0.684
MARK1	MTCL1	ENSCAPP00000007205	ENSCAPP00000001318	Microtubule affinity regulating kinase 1.	Microtubule crosslinking factor 1.	0.727