STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRSProtein tyrosine phosphatase receptor type S. (1632 aa)    
Predicted Functional Partners:
IL1RAP
Interleukin 1 receptor accessory protein.
    
 0.904
ENSCAPP00000000757
annotation not available
    
 0.889
ENSCAPP00000016030
annotation not available
    
 0.889
ENSCAPP00000005824
annotation not available
    
 0.888
SLITRK3
SLIT and NTRK like family member 3.
    
 0.835
LRRC4B
Leucine rich repeat containing 4B.
    
 0.825
LRFN5
Leucine rich repeat and fibronectin type III domain containing 5.
    
 0.800
SLITRK2
SLIT and NTRK like family member 2.
    
 0.799
PPFIA3
PTPRF interacting protein alpha 3.
    
 0.788
CTNNB1
Catenin beta 1.
    
 0.768
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.