Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRRG1Proline rich and Gla domain 1. (216 aa)    
Predicted Functional Partners:
GGCX
Gamma-glutamyl carboxylase.
    
 
 0.943
EYA4
EYA transcriptional coactivator and phosphatase 4.
      
 0.809
SLC44A1
Solute carrier family 44 member 1.
      
 0.645
RFFL
Ring finger and FYVE like domain containing E3 ubiquitin protein ligase.
      
 0.616
ABHD4
Abhydrolase domain containing 4.
      
 0.572
ENSCAPP00000009957
annotation not available
      
 0.571
LANCL2
LanC like 2.
      
 0.568
EYA1
EYA transcriptional coactivator and phosphatase 1.
      
 0.551
ENSCAPP00000006934
annotation not available
      
 0.530
FA2H
Fatty acid 2-hydroxylase.
      
 0.529
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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