Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001340annotation not available (144 aa)    
Predicted Functional Partners:
ENSCAPP00000016878
annotation not available
  
 0.974
RPS18
Ribosomal protein S18.
  
 0.970
ENSCAPP00000006028
annotation not available
  
 0.967
RPS9
Ribosomal protein S9.
  
 0.967
RPS5
Ribosomal protein S5.
  
 0.962
RPS14
Ribosomal protein S14.
  
 0.956
ENSCAPP00000004583
annotation not available
  
 0.956
ENSCAPP00000009425
annotation not available
  
 0.956
ENSCAPP00000006717
annotation not available
  
 0.955
ENSCAPP00000009097
annotation not available
  
 0.955
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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