STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001344annotation not available (269 aa)    
Predicted Functional Partners:
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.952
ENSCAPP00000008807
annotation not available
 
     0.943
ENSCAPP00000003219
annotation not available
 
  
 0.888
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.888
ENSCAPP00000010007
annotation not available
 
      0.824
FHOD1
Formin homology 2 domain containing 1.
    
 
 0.810
SUN3
Sad1 and UNC84 domain containing 3.
    
 0.789
ENSCAPP00000001998
annotation not available
 
   
 0.733
CCDC155
Coiled-coil domain containing 155.
    
 0.703
SYNE3
Spectrin repeat containing nuclear envelope family member 3.
 
  
 0.702
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.