Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BRINP3BMP/retinoic acid inducible neural specific 3. (623 aa)    
Predicted Functional Partners:
ENSCAPP00000010496
annotation not available
      
 0.678
RRP15
Ribosomal RNA processing 15 homolog.
      
 0.659
KCTD3
Potassium channel tetramerization domain containing 3.
      
 0.584
GPATCH2
G-patch domain containing 2.
      
 0.571
ENSCAPP00000017522
annotation not available
      
 0.569
LRPAP1
LDL receptor related protein associated protein 1.
      
 0.521
CCDC126
Coiled-coil domain containing 126.
      
 0.516
SPATA17
Spermatogenesis associated 17.
      
 0.513
NXPH1
Neurexophilin 1.
  
  
 0.486
ENSCAPP00000009641
annotation not available
   
  
 0.472
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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