Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001355annotation not available (485 aa)    
Predicted Functional Partners:
FUS
FUS RNA binding protein.
   
   0.978
TARDBP
TAR DNA binding protein.
   
 0.944
ENSCAPP00000008837
annotation not available
   
 
 0.897
ENSCAPP00000012603
annotation not available
   
 
 0.897
ILF3
Interleukin enhancer binding factor 3.
   
 
 0.878
PRMT1
Protein arginine methyltransferase 1.
   
 
 0.864
ENSCAPP00000017678
annotation not available
   
 0.861
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.858
DHX9
DExH-box helicase 9.
   
 0.849
ENSCAPP00000015389
annotation not available
   
 0.848
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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