Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ITGA3Integrin subunit alpha 3. (979 aa)    
Predicted Functional Partners:
ITGB1
Integrin subunit beta 1.
   
 0.999
ITGB4
Integrin subunit beta 4.
   
 0.994
ENSCAPP00000016591
annotation not available
   
 0.993
ITGB5
Integrin subunit beta 5.
   
 0.993
ITGA4
Integrin subunit alpha 4.
    
 0.992
ITGA10
Integrin subunit alpha 10.
   
 0.992
TLN1
Talin 1.
    
 0.989
ENSCAPP00000016185
annotation not available
   
 0.989
CD151
CD151 molecule (Raph blood group).
    
 0.985
ITGB7
Integrin subunit beta 7.
   
 0.985
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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