STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGA3Integrin subunit alpha 3. (979 aa)    
Predicted Functional Partners:
ITGB1
Integrin subunit beta 1.
   
 0.981
ITGB4
Integrin subunit beta 4.
   
 0.977
ITGB6
Integrin subunit beta 6.
   
 0.968
ITGB5
Integrin subunit beta 5.
   
 0.968
ENSCAPP00000016185
annotation not available
   
 0.967
ITGB8
Integrin subunit beta 8.
    
 0.964
LAMC3
Laminin subunit gamma 3.
   
 0.959
ITGB7
Integrin subunit beta 7.
   
 0.959
LAMC1
Laminin subunit gamma 1.
   
 0.947
LAMA2
Laminin subunit alpha 2.
    
 0.946
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.