STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001366annotation not available (274 aa)    
Predicted Functional Partners:
TMEM19
Transmembrane protein 19.
    
   0.926
USE1
Unconventional SNARE in the ER 1.
    
   0.856
GPAT4
Glycerol-3-phosphate acyltransferase 4.
      
 0.822
ACSL3
acyl-CoA synthetase long chain family member 3.
      
 0.718
ASCL3
Achaete-scute family bHLH transcription factor 3.
      
 0.689
AGPAT2
1-acylglycerol-3-phosphate O-acyltransferase 2.
      
 0.676
FAXDC2
Fatty acid hydroxylase domain containing 2.
    
 
 0.646
SC5D
sterol-C5-desaturase.
    
 
 0.638
RINT1
RAD50 interactor 1.
      
 0.613
ENSCAPP00000005843
annotation not available
    
   0.612
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.