Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CETN1Centrin 1. (172 aa)    
Predicted Functional Partners:
TNNC1
Troponin C1, slow skeletal and cardiac type.
    
 0.969
MYH8
Myosin heavy chain 8.
    
  0.968
MYH14
Myosin heavy chain 14.
    
 0.964
XPC
XPC complex subunit, DNA damage recognition and repair factor.
    
 0.962
CALML3
Calmodulin like 3.
    
 0.961
MYH11
Myosin heavy chain 11.
    
  0.956
MYL1
Myosin light chain 1.
     
  0.956
MYH7B
Myosin heavy chain 7B.
    
  0.955
ENSCAPP00000017763
annotation not available
    
 0.955
MYO18A
Myosin XVIIIA.
    
 0.953
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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