Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GTF2A1LGeneral transcription factor IIA subunit 1 like. (438 aa)    
Predicted Functional Partners:
GTF2A2
General transcription factor IIA subunit 2.
    
 0.994
TBPL1
TATA-box binding protein like 1.
   
 0.992
TBP
TATA-box binding protein.
   
 0.986
ENSCAPP00000015721
annotation not available
   
 0.968
GTF2B
General transcription factor IIB.
   
 0.967
GTF2A1
General transcription factor IIA subunit 1.
    
  0.956
GTF2E2
General transcription factor IIE subunit 2.
    
 0.950
ENSCAPP00000011573
annotation not available
    
 0.923
TAF12
TATA-box binding protein associated factor 12.
   
 0.919
GTF2E1
General transcription factor IIE subunit 1.
    
 0.913
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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