STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTUD7AOTU deubiquitinase 7A. (556 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.736
ENSCAPP00000010366
annotation not available
    
  0.736
TNF
Tumor necrosis factor.
   
 0.730
RIPK4
Receptor interacting serine/threonine kinase 4.
   
 0.726
ENSCAPP00000000492
annotation not available
    
  0.723
ENSCAPP00000004155
annotation not available
    
  0.723
ENSCAPP00000014462
annotation not available
    
  0.723
TRAF6
TNF receptor associated factor 6.
    
 0.711
TNIP1
TNFAIP3 interacting protein 1.
    
 0.681
ENSCAPP00000012790
annotation not available
    
 0.681
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.