STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001383annotation not available (917 aa)    
Predicted Functional Partners:
DDX50
DExD-box helicase 50.
      
 0.736
REV1
REV1 DNA directed polymerase.
      
 0.686
CSGALNACT1
Chondroitin sulfate N-acetylgalactosaminyltransferase 1.
      
 0.686
SYT1
Synaptotagmin 1.
      
 0.680
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
      
 0.674
CHST11
Carbohydrate sulfotransferase 11.
      
 0.664
ENSCAPP00000004359
annotation not available
      
 0.656
CSGALNACT2
Chondroitin sulfate N-acetylgalactosaminyltransferase 2.
      
 0.572
TACR2
Tachykinin receptor 2.
      
 0.570
SLC39A7
Solute carrier family 39 member 7.
      
 0.566
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.