Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001389annotation not available (119 aa)    
Predicted Functional Partners:
BACH1
BTB domain and CNC homolog 1.
    
  0.996
CUL1
Cullin 1.
    
 0.989
SKP1
S-phase kinase associated protein 1.
    
 0.980
KLHL12
Kelch like family member 12.
    
 0.977
ENSCAPP00000003806
annotation not available
    
  0.942
SUFU
SUFU negative regulator of hedgehog signaling.
    
 
 0.939
RBX1
Ring-box 1.
    
 0.928
KLHL28
Kelch like family member 28.
    
 0.920
KEAP1
Kelch like ECH associated protein 1.
    
  0.898
KLHL17
Kelch like family member 17.
    
  0.886
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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