Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001392annotation not available (208 aa)    
Predicted Functional Partners:
ABCE1
ATP binding cassette subfamily E member 1.
    
 0.983
HSPA5
Heat shock protein family A (Hsp70) member 5.
   
 0.966
DHX33
DEAH-box helicase 33.
   
 0.939
TRAF7
TNF receptor associated factor 7.
    
 0.924
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.881
SEC63
SEC63 homolog, protein translocation regulator.
    
 
 0.877
OAS1
2'-5'-oligoadenylate synthetase 1.
   
 
 0.861
CUL1
Cullin 1.
    
 0.836
TMED10
Transmembrane p24 trafficking protein 10.
    
  0.835
ENSCAPP00000008520
annotation not available
    
 0.819
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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