STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NDC1NDC1 transmembrane nucleoporin. (433 aa)    
Predicted Functional Partners:
NUP93
Nucleoporin 93.
   
 0.999
NUP35
Nucleoporin 35.
   
 0.998
NUP188
Nucleoporin 188.
   
 0.997
NUP155
Nucleoporin 155.
   
 0.996
NUP98
Nucleoporin 98.
    
 0.993
ENSCAPP00000017022
annotation not available
   
 0.992
NUP205
Nucleoporin 205.
   
 0.991
NUP88
Nucleoporin 88.
    
 0.990
RANBP2
RAN binding protein 2.
    
 0.986
NUP214
Nucleoporin 214.
    
 0.983
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.