STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAD4SMAD family member 4. (511 aa)    
Predicted Functional Partners:
ENSCAPP00000002730
annotation not available
   
 0.999
ENSCAPP00000007274
annotation not available
   
 0.999
SMAD1
SMAD family member 1.
   
 0.999
ENSCAPP00000008686
annotation not available
    
 0.999
SMAD2
SMAD family member 2.
   
 0.999
SKIL
SKI like proto-oncogene.
    
 0.998
SKI
SKI proto-oncogene.
    
 0.998
SMAD5
SMAD family member 5.
   
 0.997
TGFBR1
Transforming growth factor beta receptor 1.
    
 0.994
HDAC1
Histone deacetylase 1.
    
 0.991
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.