STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001407annotation not available (150 aa)    
Predicted Functional Partners:
SFTPC
Surfactant protein C.
   
 
 0.956
SFTPB
Surfactant protein B.
   
 
 0.922
ENSCAPP00000012569
annotation not available
   
 
 0.750
CD207
CD207 molecule.
   
  0.697
ENSCAPP00000012784
annotation not available
   
  0.697
COLEC10
Collectin subfamily member 10.
     
0.668
TNC
Tenascin C.
    
  0.660
TNR
Tenascin R.
    
  0.660
TNN
Tenascin N.
    
  0.660
ENSCAPP00000001403
annotation not available
    
 0.571
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.