Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NCK1NCK adaptor protein 1. (372 aa)    
Predicted Functional Partners:
LCP2
Lymphocyte cytosolic protein 2.
    
 0.998
ENSCAPP00000000244
annotation not available
    
 0.996
NCK2
NCK adaptor protein 2.
   
  0.996
WASL
WASP like actin nucleation promoting factor.
    
 0.992
WAS
WASP actin nucleation promoting factor.
    
 0.991
WIPF2
WAS/WASL interacting protein family member 2.
    
 0.987
PAK2
P21 (RAC1) activated kinase 2.
    
 0.986
SOS1
SOS Ras/Rac guanine nucleotide exchange factor 1.
    
 0.985
ENSCAPP00000013362
annotation not available
    
 0.984
EGFR
Epidermal growth factor receptor.
    
 
 0.966
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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