ENSCAPP00000001423 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000001423

annotation not available (344 aa)

Predicted Functional Partners:

LMNA

0.913

ENSCAPP00000006541

0.868

ENSCAPP00000010453

0.846

SUN2

0.808

FAM169A

0.786

BANF2

0.782

CASP6

0.764

SUN1

0.762

ENSCAPP00000011676

0.739

ENSCAPP00000008807

0.728

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BANF2	ENSCAPP00000001423	ENSCAPP00000018293	ENSCAPP00000001423	Barrier to autointegration factor 2.	annotation not available	0.782
BANF2	ENSCAPP00000010453	ENSCAPP00000018293	ENSCAPP00000010453	Barrier to autointegration factor 2.	annotation not available	0.958
BANF2	ENSCAPP00000011676	ENSCAPP00000018293	ENSCAPP00000011676	Barrier to autointegration factor 2.	annotation not available	0.815
BANF2	LMNA	ENSCAPP00000018293	ENSCAPP00000014374	Barrier to autointegration factor 2.	Lamin A/C.	0.867
BANF2	SUN1	ENSCAPP00000018293	ENSCAPP00000011315	Barrier to autointegration factor 2.	Sad1 and UNC84 domain containing 1.	0.428
CASP6	ENSCAPP00000001423	ENSCAPP00000006130	ENSCAPP00000001423	Caspase 6.	annotation not available	0.764
CASP6	LMNA	ENSCAPP00000006130	ENSCAPP00000014374	Caspase 6.	Lamin A/C.	0.934
ENSCAPP00000001423	BANF2	ENSCAPP00000001423	ENSCAPP00000018293	annotation not available	Barrier to autointegration factor 2.	0.782
ENSCAPP00000001423	CASP6	ENSCAPP00000001423	ENSCAPP00000006130	annotation not available	Caspase 6.	0.764
ENSCAPP00000001423	ENSCAPP00000006541	ENSCAPP00000001423	ENSCAPP00000006541	annotation not available	annotation not available	0.868
ENSCAPP00000001423	ENSCAPP00000008807	ENSCAPP00000001423	ENSCAPP00000008807	annotation not available	annotation not available	0.728
ENSCAPP00000001423	ENSCAPP00000010453	ENSCAPP00000001423	ENSCAPP00000010453	annotation not available	annotation not available	0.846
ENSCAPP00000001423	ENSCAPP00000011676	ENSCAPP00000001423	ENSCAPP00000011676	annotation not available	annotation not available	0.739
ENSCAPP00000001423	FAM169A	ENSCAPP00000001423	ENSCAPP00000011404	annotation not available	Family with sequence similarity 169 member A.	0.786
ENSCAPP00000001423	LMNA	ENSCAPP00000001423	ENSCAPP00000014374	annotation not available	Lamin A/C.	0.913
ENSCAPP00000001423	SUN1	ENSCAPP00000001423	ENSCAPP00000011315	annotation not available	Sad1 and UNC84 domain containing 1.	0.762
ENSCAPP00000001423	SUN2	ENSCAPP00000001423	ENSCAPP00000003867	annotation not available	Sad1 and UNC84 domain containing 2.	0.808
ENSCAPP00000006541	ENSCAPP00000001423	ENSCAPP00000006541	ENSCAPP00000001423	annotation not available	annotation not available	0.868
ENSCAPP00000006541	ENSCAPP00000010453	ENSCAPP00000006541	ENSCAPP00000010453	annotation not available	annotation not available	0.987
ENSCAPP00000006541	ENSCAPP00000011676	ENSCAPP00000006541	ENSCAPP00000011676	annotation not available	annotation not available	0.833