STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THAP2THAP domain containing 2. (141 aa)    
Predicted Functional Partners:
HCFC1
Host cell factor C1.
    
 0.965
HCFC2
Host cell factor C2.
    
  0.964
DNAJB8
DnaJ heat shock protein family (Hsp40) member B8.
    
  0.625
TRIM71
Tripartite motif containing 71.
    
  0.557
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.556
ENSCAPP00000011735
annotation not available
      
 0.553
GART
annotation not available
     
  0.505
BARD1
BRCA1 associated RING domain 1.
    
 0.484
KDM2B
Lysine demethylase 2B.
    
  0.418
KDM2A
Lysine demethylase 2A.
    
  0.418
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.