Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CC2D1BCoiled-coil and C2 domain containing 1B. (750 aa)    
Predicted Functional Partners:
MYLK
Myosin light chain kinase.
    
   0.959
CHMP4B
Charged multivesicular body protein 4B.
    
 0.899
CHMP4C
Charged multivesicular body protein 4C.
    
 0.863
H2AZ2
H2A.Z variant histone 2.
      
 0.852
ENSCAPP00000017989
annotation not available
     
 0.770
ENSCAPP00000015929
annotation not available
    
 0.752
CRBN
Cereblon.
     
 0.723
TEP1
Telomerase associated protein 1.
     
  0.719
ENSCAPP00000007435
annotation not available
     
 0.712
ENSCAPP00000006743
annotation not available
     
 0.705
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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