STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001438annotation not available (278 aa)    
Predicted Functional Partners:
ENSCAPP00000015379
annotation not available
     
 0.929
BLOC1S6
Biogenesis of lysosomal organelles complex 1 subunit 6.
     
 0.924
SNAP25
Synaptosome associated protein 25.
     
 0.922
BLOC1S2
Biogenesis of lysosomal organelles complex 1 subunit 2.
     
 0.920
WASHC4
WASH complex subunit 4.
     
 0.920
PI4KA
Phosphatidylinositol 4-kinase alpha.
    
 0.918
PI4KB
Phosphatidylinositol 4-kinase beta.
    
 0.918
STX12
Syntaxin 12.
     
 0.916
ENSCAPP00000017524
annotation not available
     
 0.898
PIKFYVE
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
 0.879
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.