STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCUBE2Signal peptide, CUB domain and EGF like domain containing 2. (803 aa)    
Predicted Functional Partners:
ENSCAPP00000000270
annotation not available
    
 0.963
ADAMTS18
ADAM metallopeptidase with thrombospondin type 1 motif 18.
   
 0.920
USH1C
USH1 protein network component harmonin.
    
 0.911
ENSCAPP00000013531
annotation not available
    
 0.898
HIVEP3
HIVEP zinc finger 3.
    
 0.891
SALL4
Spalt like transcription factor 4.
      
 0.880
GPR84
G protein-coupled receptor 84.
    
 
 0.859
KIF1B
Kinesin family member 1B.
    
 0.853
SELENOS
Selenoprotein S.
      
 0.800
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.787
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.