Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DDX47DEAD-box helicase 47. (250 aa)    
Predicted Functional Partners:
WDR46
WD repeat domain 46.
   
 0.993
PDCD11
Programmed cell death 11.
  
 0.989
DDX52
DExD-box helicase 52.
  
0.989
NGDN
Neuroguidin.
   
 0.989
KRR1
KRR1 small subunit processome component homolog.
   
 0.988
DCAF13
DDB1 and CUL4 associated factor 13.
   
  0.981
NOP14
NOP14 nucleolar protein.
   
 0.978
DDX49
DEAD-box helicase 49.
   
 0.973
UTP25
UTP25 small subunit processor component.
   
 0.968
NOC4L
Nucleolar complex associated 4 homolog.
   
  0.966
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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