STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMBRA1Autophagy and beclin 1 regulator 1. (1279 aa)    
Predicted Functional Partners:
CUL4A
Cullin 4A.
    
 0.997
ENSCAPP00000005383
annotation not available
    
 0.997
DDB1
Damage specific DNA binding protein 1.
    
 0.997
DDA1
DET1 and DDB1 associated 1.
    
  0.997
ULK1
Unc-51 like autophagy activating kinase 1.
   
 0.996
CRBN
Cereblon.
    
 0.991
ENSCAPP00000009010
annotation not available
    
  0.987
ULK2
Unc-51 like autophagy activating kinase 2.
   
 0.986
TRAF6
TNF receptor associated factor 6.
    
 0.984
PINK1
PTEN induced kinase 1.
    
 0.975
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.