STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPFIA2PTPRF interacting protein alpha 2. (1075 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.992
MPP1
Membrane palmitoylated protein 1.
    
 0.787
ENSCAPP00000011372
annotation not available
   
 0.776
ENSCAPP00000012782
annotation not available
   
 0.776
GIT1
GIT ArfGAP 1.
    
 
 0.772
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 0.707
MPP2
Membrane palmitoylated protein 2.
    
 0.694
MPP6
Membrane palmitoylated protein 6.
    
 0.694
PTPRS
Protein tyrosine phosphatase receptor type S.
    
 0.677
ENSCAPP00000009633
annotation not available
    
 0.677
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.