STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPFIA2PTPRF interacting protein alpha 2. (1075 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.836
MPP1
Membrane palmitoylated protein 1.
    
 0.770
PPFIA3
PTPRF interacting protein alpha 3.
   
  0.753
ERC2
ELKS/RAB6-interacting/CAST family member 2.
   
 
 0.720
ERC1
ELKS/RAB6-interacting/CAST family member 1.
    
 
 0.715
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 0.658
GIT1
GIT ArfGAP 1.
    
 
 0.649
PTPRS
Protein tyrosine phosphatase receptor type S.
    
 0.644
ENSCAPP00000009633
annotation not available
    
 0.644
ENSCAPP00000011145
annotation not available
    
 0.644
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.