Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MGPMatrix Gla protein. (104 aa)    
Predicted Functional Partners:
GGCX
Gamma-glutamyl carboxylase.
    
 
 0.959
VCL
Vinculin.
      
 0.789
DCN
Decorin.
   
  
 0.698
ENSCAPP00000017807
annotation not available
      
 0.691
BGLAP
Bone gamma-carboxyglutamate protein.
      
 0.688
ENSCAPP00000016884
annotation not available
   
  
 0.686
ENSCAPP00000010521
annotation not available
   
  
 0.683
SPP1
Secreted phosphoprotein 1.
   
  
 0.674
DMP1
Dentin matrix acidic phosphoprotein 1.
      
 0.667
ERP27
Endoplasmic reticulum protein 27.
      
 0.620
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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