STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPRA1Transmembrane protein adipocyte associated 1. (364 aa)    
Predicted Functional Partners:
ENSCAPP00000015867
annotation not available
      
 0.560
ENSCAPP00000000401
annotation not available
      
 0.548
RSPRY1
Ring finger and SPRY domain containing 1.
      
 0.545
RCBTB1
RCC1 and BTB domain containing protein 1.
   
  
 0.527
GTF3C1
General transcription factor IIIC subunit 1.
      
 0.442
RFFL
Ring finger and FYVE like domain containing E3 ubiquitin protein ligase.
      
 0.437
ENSCAPP00000015026
annotation not available
      
 0.434
IP6K2
Inositol hexakisphosphate kinase 2.
      
 0.432
ZC3H15
Zinc finger CCCH-type containing 15.
      
 0.429
CCDC106
Coiled-coil domain containing 106.
      
 0.418
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.