Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001462annotation not available (196 aa)    
Predicted Functional Partners:
SPATA17
Spermatogenesis associated 17.
   
 
 0.796
CFAP69
Cilia and flagella associated protein 69.
   
   0.792
CFAP54
Cilia and flagella associated protein 54.
   
   0.791
ENSCAPP00000000802
annotation not available
    
   0.779
GRK3
G protein-coupled receptor kinase 3.
    
   0.779
CFAP20
Cilia and flagella associated protein 20.
    
   0.779
ENSCAPP00000007643
annotation not available
    
   0.779
SPATA4
Spermatogenesis associated 4.
    
   0.779
LRRD1
Leucine rich repeats and death domain containing 1.
    
   0.779
SPACA9
Sperm acrosome associated 9.
    
   0.779
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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