STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001463annotation not available (261 aa)    
Predicted Functional Partners:
PTPN6
Protein tyrosine phosphatase non-receptor type 6.
    
 0.991
PTPN11
Protein tyrosine phosphatase non-receptor type 11.
    
 0.962
PTPRC
Protein tyrosine phosphatase receptor type C.
    
 0.891
ENSCAPP00000016316
annotation not available
    
 0.838
NCAM1
Neural cell adhesion molecule 1.
    
 0.790
ANPEP
Alanyl aminopeptidase, membrane.
     
 0.786
ENSCAPP00000004047
annotation not available
   
 0.705
CD34
CD34 molecule.
      
 0.686
ENSCAPP00000016091
annotation not available
    
 0.659
OMG
Oligodendrocyte myelin glycoprotein.
   
 0.654
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.