Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001476annotation not available (74 aa)    
Predicted Functional Partners:
ENSCAPP00000003376
annotation not available
  
 0.966
CCT3
Chaperonin containing TCP1 subunit 3.
  
 0.961
CCT2
Chaperonin containing TCP1 subunit 2.
  
 0.960
FBXW4
F-box and WD repeat domain containing 4.
    
   0.959
ENSCAPP00000001900
annotation not available
    
   0.957
KLHDC8A
Kelch domain containing 8A.
    
   0.956
MPPED1
Metallophosphoesterase domain containing 1.
    
   0.943
ENSCAPP00000009606
annotation not available
    
   0.940
ENSCAPP00000000754
annotation not available
  
 0.925
ENSCAPP00000014670
annotation not available
  
 0.925
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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