Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ITGB1BP1Integrin subunit beta 1 binding protein 1. (200 aa)    
Predicted Functional Partners:
ENSCAPP00000015824
annotation not available
    
 
 0.993
CCM2
CCM2 scaffold protein.
    
 
 0.989
ITGB1
Integrin subunit beta 1.
    
 
 0.975
TLN2
Talin 2.
    
 
 0.940
ENSCAPP00000017936
annotation not available
    
 
 0.902
TLN1
Talin 1.
    
 
 0.876
ITGA10
Integrin subunit alpha 10.
    
 
 0.857
ITGA1
Integrin subunit alpha 1.
    
 
 0.852
ENSCAPP00000016591
annotation not available
    
 
 0.852
ITGA4
Integrin subunit alpha 4.
    
 
 0.850
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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