Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARMC10Armadillo repeat containing 10. (255 aa)    
Predicted Functional Partners:
POP1
POP1 homolog, ribonuclease P/MRP subunit.
    
 0.737
LRRC19
Leucine rich repeat containing 19.
    
 0.720
TRAK2
Trafficking kinesin protein 2.
      
 0.675
OGDHL
Oxoglutarate dehydrogenase like.
   
 0.655
ENSCAPP00000014824
annotation not available
    
   0.655
MAF1
MAF1 homolog, negative regulator of RNA polymerase III.
    
   0.653
GSTO2
Glutathione S-transferase omega 2.
     
 0.653
ENSCAPP00000014889
annotation not available
    
 0.637
CDCP1
CUB domain containing protein 1.
      
 0.636
IPO4
Importin 4.
    
 
 0.632
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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