STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARMC10Armadillo repeat containing 10. (255 aa)    
Predicted Functional Partners:
LRRC19
Leucine rich repeat containing 19.
    
 
 0.633
GSTO2
Glutathione S-transferase omega 2.
     
 0.611
ECI2
enoyl-CoA delta isomerase 2.
    
  0.610
ENSCAPP00000017181
annotation not available
   
 0.605
GAK
Cyclin G associated kinase.
   
 0.588
ENSCAPP00000013876
annotation not available
    
  0.586
KDM6B
Lysine demethylase 6B.
   
 0.578
RAC1
Rac family small GTPase 1.
   
  0.575
RAC2
Rac family small GTPase 2.
   
  0.575
RAC3
Rac family small GTPase 3.
   
  0.575
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.