STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C2CD5C2 calcium dependent domain containing 5. (927 aa)    
Predicted Functional Partners:
ENSCAPP00000006375
annotation not available
    
 
 0.959
EPB41L1
Erythrocyte membrane protein band 4.1 like 1.
      
 0.753
AKT2
AKT serine/threonine kinase 2.
    
 0.677
SUPT7L
SPT7 like, STAGA complex gamma subunit.
      
 0.661
MAPK15
Mitogen-activated protein kinase 15.
    
   0.659
VIRMA
Vir like m6A methyltransferase associated.
   
  
 0.651
RNF32
Ring finger protein 32.
      
 0.643
EML4
EMAP like 4.
    
 
 0.619
FAM168B
Family with sequence similarity 168 member B.
      
 0.577
ZNHIT1
Zinc finger HIT-type containing 1.
      
 0.569
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.