STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D2BTBC1 domain family member 2B. (728 aa)    
Predicted Functional Partners:
NRDE2
NRDE-2, necessary for RNA interference, domain containing.
    
 0.806
WDR90
WD repeat domain 90.
    
   0.769
RAB7A
RAB7A, member RAS oncogene family.
    
 0.755
PLK3
Polo like kinase 3.
    
 0.719
PLK1
Polo like kinase 1.
    
 0.719
ENSCAPP00000000974
annotation not available
    
 0.719
RAB9A
RAB9A, member RAS oncogene family.
    
 0.668
ARL15
ADP ribosylation factor like GTPase 15.
    
 0.634
RAB10
RAB10, member RAS oncogene family.
    
 0.590
RAB7B
RAB7B, member RAS oncogene family.
    
 0.585
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.