Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF513Zinc finger protein 513. (545 aa)    
Predicted Functional Partners:
LYPD6
LY6/PLAUR domain containing 6.
      
 0.680
TTC7A
Tetratricopeptide repeat domain 7A.
      
 0.647
PRPF31
pre-mRNA processing factor 31.
    
 
 0.616
ENSCAPP00000000952
annotation not available
    
 0.603
PDE6A
Phosphodiesterase 6A.
    
 0.603
ENSCAPP00000011103
annotation not available
    
 
 0.602
PRPF6
pre-mRNA processing factor 6.
    
 
 0.601
OPN1SW
Opsin 1, short wave sensitive.
    
 
 0.586
IMPG2
Interphotoreceptor matrix proteoglycan 2.
      
 0.585
PCARE
Photoreceptor cilium actin regulator.
      
 0.582
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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