Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001507annotation not available (81 aa)    
Predicted Functional Partners:
ENSCAPP00000008726
annotation not available
    
 
 0.890
ZNHIT1
Zinc finger HIT-type containing 1.
     
  0.600
ENSCAPP00000014118
annotation not available
     
 0.553
ENSCAPP00000013714
annotation not available
    
   0.536
FAM83C
Family with sequence similarity 83 member C.
    
   0.536
CMC1
C-X9-C motif containing 1.
     
 0.535
SURF1
SURF1 cytochrome c oxidase assembly factor.
     
 0.535
UCK1
Uridine-cytidine kinase 1.
      
 0.454
NMNAT1
Nicotinamide nucleotide adenylyltransferase 1.
      
 0.452
PARP16
poly(ADP-ribose) polymerase family member 16.
      
 0.452
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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