Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNAP25Synaptosome associated protein 25. (205 aa)    
Predicted Functional Partners:
STX1A
Syntaxin 1A.
   
 0.999
ENSCAPP00000005959
annotation not available
   
 0.999
STX1B
Syntaxin 1B.
   
 0.999
NAPA
NSF attachment protein alpha.
   
 0.998
STX3
Syntaxin 3.
   
 0.998
STX4
Syntaxin 4.
   
 0.998
STXBP1
Syntaxin binding protein 1.
   
 0.997
NAPB
NSF attachment protein beta.
   
 0.997
SYT1
Synaptotagmin 1.
   
 0.996
VAMP1
Vesicle associated membrane protein 1.
   
 0.996
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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