Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC170Coiled-coil domain containing 170. (631 aa)    
Predicted Functional Partners:
ZNHIT1
Zinc finger HIT-type containing 1.
    
 0.924
DMAP1
DNA methyltransferase 1 associated protein 1.
   
 0.924
VPS72
Vacuolar protein sorting 72 homolog.
    
 0.924
RUVBL2
RuvB like AAA ATPase 2.
    
 0.923
ACTL6A
Actin like 6A.
    
 0.920
ACTR6
Actin related protein 6.
    
 0.916
ENSCAPP00000012893
annotation not available
    
 0.914
CFDP1
Craniofacial development protein 1.
    
 0.912
H2AZ2
H2A.Z variant histone 2.
    
 0.882
MEAF6
MYST/Esa1 associated factor 6.
    
 0.880
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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