STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP13A3ATPase 13A3. (1209 aa)    
Predicted Functional Partners:
GAK
Cyclin G associated kinase.
   
 
 0.696
PLN
Phospholamban.
    
 0.693
ATP7B
ATPase copper transporting beta.
   
 0.684
ENSCAPP00000017316
annotation not available
    
  0.660
ENSCAPP00000007793
annotation not available
   
 
 0.609
FXYD6
FXYD domain containing ion transport regulator 6.
    
  0.600
SHBG
Sex hormone binding globulin.
    
  0.570
ATP1B3
ATPase Na+/K+ transporting subunit beta 3.
    
  0.570
ATP1B1
ATPase Na+/K+ transporting subunit beta 1.
    
  0.570
ABI3BP
ABI family member 3 binding protein.
    
  0.570
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.