STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACTN1Actinin alpha 1. (877 aa)    
Predicted Functional Partners:
VCL
Vinculin.
   
 0.993
ACTN4
Actinin alpha 4.
  
0.990
ZYX
Zyxin.
   
 0.959
CTNNA1
Catenin alpha 1.
   
 0.949
CTNNA2
Catenin alpha 2.
   
 0.949
ACTB
Actin beta.
   
 0.946
ITGB1
Integrin subunit beta 1.
   
 0.945
SSX2IP
SSX family member 2 interacting protein.
    
 0.935
ENSCAPP00000016185
annotation not available
    
 0.933
ITGB7
Integrin subunit beta 7.
    
 0.928
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.