Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001526annotation not available (144 aa)    
Predicted Functional Partners:
GATAD2B
GATA zinc finger domain containing 2B.
    
 0.970
GATAD2A
GATA zinc finger domain containing 2A.
    
 0.962
ENSCAPP00000010002
annotation not available
   
 0.952
SALL4
Spalt like transcription factor 4.
    
  0.933
MTA1
Metastasis associated 1.
    
 0.928
POU5F2
POU domain class 5, transcription factor 2.
   
 0.917
HDAC1
Histone deacetylase 1.
    
 0.903
SALL3
Spalt like transcription factor 3.
   
   0.899
MYF6
Myogenic factor 6.
    
 
 0.876
MBD2
methyl-CpG binding domain protein 2.
    
 0.871
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.