STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001526annotation not available (144 aa)    
Predicted Functional Partners:
CHD3
Chromodomain helicase DNA binding protein 3.
    
 0.845
MTA2
Metastasis associated 1 family member 2.
    
  0.821
HDAC1
Histone deacetylase 1.
    
 0.821
CHD5
Chromodomain helicase DNA binding protein 5.
    
 0.802
POU5F2
POU domain class 5, transcription factor 2.
   
 0.728
ENSCAPP00000010002
annotation not available
   
 0.728
SALL4
Spalt like transcription factor 4.
    
0.728
GATAD2B
GATA zinc finger domain containing 2B.
    
 0.726
ENSCAPP00000001714
annotation not available
    
  0.691
ENSCAPP00000004252
annotation not available
    
  0.691
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (30%) [HD]