STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCC5ATP binding cassette subfamily C member 5. (1416 aa)    
Predicted Functional Partners:
ABCC3
ATP binding cassette subfamily C member 3.
     
 0.927
ABCC4
ATP binding cassette subfamily C member 4.
     
  0.911
AKAP8L
A-kinase anchoring protein 8 like.
    
   0.898
ABCC1
ATP binding cassette subfamily C member 1.
     
 0.894
ENSCAPP00000016884
annotation not available
     
 0.862
ABCG4
ATP binding cassette subfamily G member 4.
   
 0.794
MRPS7
Mitochondrial ribosomal protein S7.
     
 0.772
ABCG1
ATP binding cassette subfamily G member 1.
   
 0.757
RPL19
Ribosomal protein L19.
    
 
 0.685
SLC9A3R2
SLC9A3 regulator 2.
    
 0.646
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.