Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEZ6Seizure related 6 homolog. (961 aa)    
Predicted Functional Partners:
MVD
Mevalonate diphosphate decarboxylase.
    
 
 0.757
SDF2
Stromal cell derived factor 2.
    
 
 0.720
MPDZ
Multiple PDZ domain crumbs cell polarity complex component.
    
 0.716
WSCD1
WSC domain containing 1.
    
 
 0.693
NCAM2
Neural cell adhesion molecule 2.
    
 0.661
MPP7
Membrane palmitoylated protein 7.
    
 0.640
CD6
CD6 molecule.
    
 0.633
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.625
ENSCAPP00000003490
annotation not available
   
 
 0.600
SKAP1
Src kinase associated phosphoprotein 1.
     
 0.599
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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