STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEZ6Seizure related 6 homolog. (961 aa)    
Predicted Functional Partners:
ENSCAPP00000013876
annotation not available
    
  0.704
AP2A2
Adaptor related protein complex 2 subunit alpha 2.
    
  0.663
NDUFA8
NADH:ubiquinone oxidoreductase subunit A8.
    
  0.643
NSL1
NSL1 component of MIS12 kinetochore complex.
    
  0.617
MPDZ
Multiple PDZ domain crumbs cell polarity complex component.
    
 0.616
ECI2
enoyl-CoA delta isomerase 2.
    
  0.610
ENSCAPP00000017181
annotation not available
   
 0.605
ENSCAPP00000003454
annotation not available
    
 0.599
AP2B1
Adaptor related protein complex 2 subunit beta 1.
    
  0.595
AP1B1
Adaptor related protein complex 1 subunit beta 1.
    
  0.595
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.