STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBCK1RANBP2-type and C3HC4-type zinc finger containing 1. (504 aa)    
Predicted Functional Partners:
ENSCAPP00000015425
annotation not available
   
 0.999
OTULIN
OTU deubiquitinase with linear linkage specificity.
    
 0.985
TNF
Tumor necrosis factor.
    
 0.965
RIPK1
Receptor interacting serine/threonine kinase 1.
    
 0.906
TRAF2
TNF receptor associated factor 2.
    
 0.876
BIRC3
Baculoviral IAP repeat containing 3.
    
 0.874
ENSCAPP00000013239
annotation not available
    
 0.864
BIRC2
Baculoviral IAP repeat containing 2.
    
 0.857
ENSCAPP00000012533
annotation not available
    
 0.842
XIAP
X-linked inhibitor of apoptosis.
    
 0.823
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.