Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000001537annotation not available (129 aa)    
Predicted Functional Partners:
OGFOD1
2-oxoglutarate and iron dependent oxygenase domain containing 1.
   
 
 0.956
SYCE3
Synaptonemal complex central element protein 3.
    
 0.933
REC8
REC8 meiotic recombination protein.
    
 0.931
CENPS
Centromere protein S.
     
 0.928
ZBTB16
Zinc finger and BTB domain containing 16.
    
 
 0.915
SPO11
SPO11 initiator of meiotic double stranded breaks.
      
 0.904
DDX4
DEAD-box helicase 4.
   
 
 0.894
DAZL
Deleted in azoospermia like.
    
 0.888
ENSCAPP00000008954
annotation not available
    
 0.887
ENSCAPP00000003685
annotation not available
    
 0.882
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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